{
  "_id": "6a0ff5b4acfb0bcc41c77bad",
  "Package": "growthcurver",
  "Type": "Package",
  "Title": "Simple Metrics to Summarize Growth Curves",
  "Version": "0.3.1",
  "Date": "2020-10-3",
  "Authors@R": "person(\"Kathleen\", \"Sprouffske\", email = \"sprouffske@gmail.com\", role = c(\"aut\", \"cre\"))",
  "Description": "Fits the logistic equation to microbial growth curve data\n(e.g., repeated absorbance measurements taken from a plate\nreader over time). From this fit, a variety of metrics are\nprovided, including the maximum growth rate, the doubling time,\nthe carrying capacity, the area under the logistic curve, and\nthe time to the inflection point. Method described in\nSprouffske and Wagner (2016) <doi:10.1186/s12859-016-1016-7>.",
  "LazyData": "TRUE",
  "URL": "https://github.com/sprouffske/growthcurver",
  "BugReports": "https://github.com/sprouffske/growthcurver/issues",
  "License": "GPL (>= 2)",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.1.1",
  "Repository": "https://sprouffske.r-universe.dev",
  "Date/Publication": "2020-10-15 15:10:49 UTC",
  "RemoteUrl": "https://github.com/sprouffske/growthcurver",
  "RemoteRef": "HEAD",
  "RemoteSha": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-22 06:16:36 UTC",
    "User": "root"
  },
  "Author": "Kathleen Sprouffske [aut, cre]",
  "Maintainer": "Kathleen Sprouffske <sprouffske@gmail.com>",
  "MD5sum": "bef74921d2afb023a2791d89e87416ee",
  "_user": "sprouffske",
  "_type": "src",
  "_file": "growthcurver_0.3.1.tar.gz",
  "_fileid": "f2cb3af78f40e2ab1009ed66c341363c218f3308a93d1e279038064d6ed56934",
  "_filesize": 748670,
  "_sha256": "f2cb3af78f40e2ab1009ed66c341363c218f3308a93d1e279038064d6ed56934",
  "_created": "2026-05-22T06:16:36.000Z",
  "_published": "2026-05-22T06:20:36.350Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77326758109,
      "time": 123,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7154012192"
    },
    {
      "job": 77326758120,
      "time": 123,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7154012347"
    },
    {
      "job": 77326758118,
      "time": 206,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7154019125"
    },
    {
      "job": 77326758114,
      "time": 165,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7154017600"
    },
    {
      "job": 77326477712,
      "time": 154,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7153985187"
    },
    {
      "job": 77326758080,
      "time": 87,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7154004890"
    },
    {
      "job": 77326758166,
      "time": 130,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7154013935"
    },
    {
      "job": 77326758197,
      "time": 69,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7154000482"
    },
    {
      "job": 77326758187,
      "time": 98,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7154006999"
    }
  ],
  "_buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/sprouffske/growthcurver",
  "_commit": {
    "id": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
    "author": "Kathleen Sprouffske <sprouffske@gmail.com>",
    "committer": "Kathleen Sprouffske <sprouffske@gmail.com>",
    "message": "version 0.3.1\n",
    "time": 1602774649
  },
  "_maintainer": {
    "name": "Kathleen Sprouffske",
    "email": "sprouffske@gmail.com",
    "login": "sprouffske",
    "description": "",
    "uuid": 3835724
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0",
      "role": "Depends"
    },
    {
      "package": "minpack.lm",
      "version": ">= 1.2",
      "role": "Imports"
    },
    {
      "package": "stats",
      "version": ">= 4.0",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "version": ">= 4.0",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "version": ">= 4.0",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "dplyr",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "sprouffske",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [],
  "_tags": [],
  "_stars": 48,
  "_contributors": [
    {
      "user": "sprouffske",
      "count": 30,
      "uuid": 3835724
    },
    {
      "user": "fmkerckhof",
      "count": 5,
      "uuid": 2431458
    },
    {
      "user": "kieran-mace",
      "count": 1,
      "uuid": 18296227
    }
  ],
  "_userbio": {
    "uuid": 3835724,
    "type": "user",
    "name": "Kathleen Sprouffske"
  },
  "_downloads": {
    "count": 1907,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/growthcurver"
  },
  "_mentions": 20,
  "_devurl": "https://github.com/sprouffske/growthcurver",
  "_searchresults": 172,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/growthcurver.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/sprouffske/growthcurver",
  "_realowner": "sprouffske",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2015-11-04"
    },
    {
      "version": "0.2.0",
      "date": "2016-03-09"
    },
    {
      "version": "0.2.1",
      "date": "2016-03-29"
    },
    {
      "version": "0.3.0",
      "date": "2018-07-30"
    },
    {
      "version": "0.3.1",
      "date": "2020-10-20"
    }
  ],
  "_exports": [
    "gcfit",
    "gcvals",
    "NAtT",
    "SummarizeGrowth",
    "SummarizeGrowthByPlate"
  ],
  "_datasets": [
    {
      "name": "growthdata",
      "title": "Simulated growth curve data",
      "object": "growthdata",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "time",
        "A1",
        "B1",
        "C1",
        "D1",
        "E1",
        "F1",
        "G1",
        "H1",
        "A2",
        "B2",
        "C2",
        "D2",
        "E2",
        "F2",
        "G2",
        "H2",
        "A3",
        "B3",
        "C3",
        "D3",
        "E3",
        "F3",
        "G3",
        "H3",
        "A4",
        "B4",
        "C4",
        "D4",
        "E4",
        "F4",
        "G4",
        "H4",
        "A5",
        "B5",
        "C5",
        "D5",
        "E5",
        "F5",
        "G5",
        "H5",
        "A6",
        "B6",
        "C6",
        "D6",
        "E6",
        "F6",
        "G6",
        "H6",
        "A7",
        "B7",
        "C7",
        "D7",
        "E7",
        "F7",
        "G7",
        "H7",
        "A8",
        "B8",
        "C8",
        "D8",
        "E8",
        "F8",
        "G8",
        "H8",
        "A9",
        "B9",
        "C9",
        "D9",
        "E9",
        "F9",
        "G9",
        "H9",
        "A10",
        "B10",
        "C10",
        "D10",
        "E10",
        "F10",
        "G10",
        "H10",
        "A11",
        "B11",
        "C11",
        "D11",
        "E11",
        "F11",
        "G11",
        "H11",
        "A12",
        "B12",
        "C12",
        "D12",
        "E12",
        "F12",
        "G12",
        "H12"
      ],
      "rows": 145,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "gcfit",
      "title": "Creates an object of class gcfit.",
      "topics": [
        "gcfit"
      ]
    },
    {
      "page": "gcvals",
      "title": "Creates an object of type gcvals.",
      "topics": [
        "gcvals"
      ]
    },
    {
      "page": "growthdata",
      "title": "Simulated growth curve data",
      "topics": [
        "growthdata"
      ]
    },
    {
      "page": "NAtT",
      "title": "Number of Cells at Time t",
      "topics": [
        "NAtT"
      ]
    },
    {
      "page": "SummarizeGrowth",
      "title": "Summarize Growth Curves",
      "topics": [
        "SummarizeGrowth"
      ]
    },
    {
      "page": "SummarizeGrowthByPlate",
      "title": "Summarize Growth Curves",
      "topics": [
        "SummarizeGrowthByPlate"
      ]
    }
  ],
  "_readme": "https://github.com/sprouffske/growthcurver/raw/HEAD/README.md",
  "_rundeps": [
    "minpack.lm"
  ],
  "_vignettes": [
    {
      "source": "Growthcurver-vignette.Rmd",
      "filename": "Growthcurver-vignette.html",
      "title": "Using Growthcurver",
      "author": "Kathleen Sprouffske",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Input data",
        "Background correction",
        "A simple first example",
        "Output metrics",
        "Get growth curves for a plate",
        "Customize growth curves for a plate",
        "Quality control and best practices",
        "Plot the curves and your data",
        "Check for poor fit notes",
        "Identify outliers"
      ],
      "created": "2015-10-21 13:53:09",
      "modified": "2020-10-03 15:25:49",
      "commits": 10
    }
  ],
  "_score": 8.674241632048805,
  "_indexed": true,
  "_nocasepkg": "growthcurver",
  "_universes": [
    "sprouffske"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.3.1",
      "date": "2026-05-22T06:18:42.000Z",
      "distro": "noble",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "f37146c0abfd25f4e74b1afef375b28b0a67139f175637139d92edb6c11142f4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.3.1",
      "date": "2026-05-22T06:18:40.000Z",
      "distro": "noble",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "84124b4cf62eed0e3d9e9e339215e693cb15ac1fec7ff5c9dbea38534b58065e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.3.1",
      "date": "2026-05-22T06:19:12.000Z",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "e17a92a4e1a7b31049dcb92e5bd440e8931d1e66564e5bdc01ee1c1b23f4d5bd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.3.1",
      "date": "2026-05-22T06:19:09.000Z",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "59d4dffc014cbe4eef92d8a6288809f0962127dc2c42d5ff170c8bde48f39a4c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.3.1",
      "date": "2026-05-22T06:18:18.000Z",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "92f76dc1a4e7e41277f503379e46ebfdfaea7b3b6554ceb5042117dc8e47a413",
      "status": "success",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.3.1",
      "date": "2026-05-22T06:18:43.000Z",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "3063f50a66f50b5178819f1b7e5b4f2168ceca177440c47afe13ecb9740cca7c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.3.1",
      "date": "2026-05-22T06:17:43.000Z",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "861e3551c758a8495fda592819fd45caea5c62daf4aac5da5cf4c36ab39c749c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.3.1",
      "date": "2026-05-22T06:18:11.000Z",
      "commit": "25ea4b301311e95cbc8d18f5c30fb4c750782869",
      "fileid": "658da3a70bdfbafebf62bd2815cb725d7c8fabbaf7d2df3718bb536dfc54c020",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/sprouffske/actions/runs/26271697092"
    }
  ]
}